Wednesday 11 April 2012

       SMILES :)

For our last assignment under madam Linda, we have to do SMILES using chemsketch. There are total of 4 slides of smiles and we manage to finish it within 3 hours. These pictures below represent our hard work =) hope u enjoy it ^_^












For further information about SMILES notations, please click on the link below:
SMILESCAS Database







For your information, through SMILES notations, the system will automatically that the other connections are satisfied by hydrogen bonds if enough bonds are not identified by the user.
examples :

CC, CH3CH3 (ethane) C=C, CH2CH2 (ethene)
CBr, CH3Br (bromoethane) Na.Cl, NaCl (sodium chloride)

Monday 12 March 2012

PDB and Raswin

On 12th March, we are introduced to PDB (Protein Data Bank) and Raswin.

PROTEIN DATA BANK (PDB)
PDB is a repository for the 3-D structural data of large biological molecules, such as proteins and nucleic acid. The data typically obtained by X-ray crystallography or NMR spectroscopy and submitted by biologist and biochemist around the world, are free accessible on the internet via the websites of its member organisation. The PDB is overseen by an organization called the Worldwide Protein Data Bank, wwPDB. The PDB is a key resource in areas of structural biology, such as structural genomics.

All about PDB, do click here :


RASWIN





PDB Example Description
LexA
1L3F
 
Structure of the 84 residue DNA binding domain of the Escherichiacoli LexA.
Thermolysin
3FLF
   
A thermostable neutral metalloproteinase enzyme produce by the gram-positive bacteria Bacillus termoprotiolyticus
HtrA
1L1J

HtrA(high temperature requirement A) a periplasmic heat-shock protein
DegS
3LGI
Periplasmic eschericha coli protease

Monday 5 March 2012

CHEMSKETCH~

Four our second assignment, we are all assigned to do chemsketch. Do you know what is Chemsketch ? Lets find out here :


ACD/ChemSketch is a chemically intelligent drawing interface that allows you to draw almost any chemical structure including organics, organometallics, polymers and Markush structures. Use it to produce professional looking structures and diagrams for report and publications.


Drawing Simple Structures

9.2- Energy Reaction Diagram

9.3- Different Kinds of Orbitals


9.4- Vacuum Distillation Apparatus
9.5- A Two-chain DNA Strand

9.6 - Lipids and Micelles
                       

Assignment Title
9.2 Drawing The Energy Reaction of Diagram
9.3 Drawing Different Kinds of Orbitals
9.4 Drawing Vacuum Distillation Apparatus
9.5 Drawing a Two-Chain DNA Strand
9.6 Drawing Lipids and Micelles

Want to know more about Chemsketch? Try check out this link =)
ACD labs
If u want to download the software for Chemsketch, just open this link:
Freeware Chemsketch

Sunday 12 February 2012

WEU 959

Assalamualaikum :)



We are from group 2 for Computer in Science (KOS 1110) batch 112.
This group consists of three members:-
1) W-Wan Azura bt Wan Ishak
2) E-Emilyana bt Ehwan
3) U-Ummi Humairah bt Mohd Isnin

959 represent our month of birth:-
Wan Azura was born in the same month with Emilyana which is September. Wan Azura was born on 29/9/1992 while Emilyana was born on 14/9/1992. For Ummi Humairah, she was born on 5/5/1992 . Therefore, WEU 959 will represent our future Lamborghini's number plate.

This table below will give a brief information about ourselves:
Nickname Matrix number Course Hometown Favourite coffee
Wanzu 1126226 Biotech Kuantan, Pahang Espresso
Emi 1120556 CTS Ampang, Selangor Frappucino
Ummi 1125518 CTS Pasir Gudang, Johor Cappucino


         Want to know more about us? just add us on facebook =)
Emi's frappucino
Ummi's cappucino
Wanzu's espresso
  
                                              What is Caramel Macchiato?

Caramel Macchiato is essentially a Café Macchiato with the additional ingredient caramel. Unlike the regular Café Macchiato, this beverage is typically served cold or sometimes even with a dash of ice. This beverage has become popular throughout the world.
List of famous coffee beverages :
Coffee latte
Frappucino
Espresso
Skinny latte